BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F05SP1|AL428938
(846 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1672 0.0
3x_Contig1803 506 e-143
>3x_Contig1805
Length = 19369
Score = 1672 bits (842), Expect = 0.0
Identities = 844/846 (99%)
Strand = Plus / Plus
Query: 1 acacaagctgatgaattggacaacaaggtctggctttcattctctcatgacaccgatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10692 acacaagctgatgaattggacaacaaggtctggctttcattctctcatgacaccgatatc 10751
Query: 61 caacaattcatttcagcgcttggtttgatcgacaacggcgtcactgagtattctctcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10752 caacaattcatttcagcgcttggtttgatcgacaacggcgtcactgagtattctctcgat 10811
Query: 121 caagttgatttccaaaacatccagcaactaagttgggtgacgcctatgggaggtcgtatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10812 caagttgatttccaaaacatccagcaactaagttgggtgacgcctatgggaggtcgtatc 10871
Query: 181 ttcactgaaaaattgaagtgtggaaatgcctcttatgttcgttatattatcaacgatgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10872 ttcactgaaaaattgaagtgtggaaatgcctcttatgttcgttatattatcaacgatgtg 10931
Query: 241 attattccagttccaggttgcacctcaggtccagggttttcctgtcctatcgaggacttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10932 attattccagttccaggttgcacctcaggtccagggttttcctgtcctatcgaggacttt 10991
Query: 301 gacgattacatcacaaacagattgaatggcattgactatgtttccagttgcgaagttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10992 gacgattacatcacaaacagattgaatggcattgactatgtttccagttgcgaagttcaa 11051
Query: 361 caggtgtctaacaccaccgaacttactttytactgggactacaatgaagtggagtacaac 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 11052 caggtgtctaacaccaccgaacttactttctactgggactacaatgaagtggagtacaac 11111
Query: 421 ggtcccgttagtaacaagtaagtctcataccgactctattaacagtgattgagttcaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11112 ggtcccgttagtaacaagtaagtctcataccgactctattaacagtgattgagttcaaag 11171
Query: 481 atgttgggcttttttttccccgacgctgctaagcatttctaataccccatctgaaggatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11172 atgttgggcttttttttccccgacgctgctaagcatttctaataccccatctgaaggatc 11231
Query: 541 ttttttgtatacatggaagttgaatatccaaaaaaatcccattatttcgttcttgagcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11232 ttttttgtatacatggaagttgaatatccaaaaaaatcccattatttcgttcttgagcac 11291
Query: 601 tcgccgagtaggcagttacatgtattgtggccatagtctcttggttcgtacttcatttag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11292 tcgccgagtaggcagttacatgtattgtggccatagtctcttggttcgtacttcatttag 11351
Query: 661 ttaaagagctttttaaagtttatacgaagaggtctgatatcgttaatatccaaggaattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11352 ttaaagagctttttaaagtttatacgaagaggtctgatatcgttaatatccaaggaattt 11411
Query: 721 acagcattgcttctttctccgggaaacttctccagatcttaaaatctgttgaaatttcgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11412 acagcattgcttctttctccgggaaacttctccagatcttaaaatctgttgaaatttcgg 11471
Query: 781 caataatcggaactgtattaaatacgtcttgytacgtacggcgttttatgaaatttttat 840
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11472 caataatcggaactgtattaaatacgtcttgctacgtacggcgttttatgaaatttttat 11531
Query: 841 ggtaat 846
||||||
Sbjct: 11532 ggtaat 11537
>3x_Contig1803
Length = 52241
Score = 506 bits (255), Expect = e-143
Identities = 397/445 (89%)
Strand = Plus / Plus
Query: 1 acacaagctgatgaattggacaacaaggtctggctttcattctctcatgacaccgatatc 60
|||||||||||||| ||||| || |||||||||||||| || |||||||| ||||||||
Sbjct: 50641 acacaagctgatgatttggataataaggtctggctttctttttctcatgataccgatatt 50700
Query: 61 caacaattcatttcagcgcttggtttgatcgacaacggcgtcactgagtattctctcgat 120
||||||||| |||| || ||||| | ||||||| || |||||||| || ||||| ||
Sbjct: 50701 caacaattcgtttcggcacttggccttttcgacaatggtgtcactgaatactctctggaa 50760
Query: 121 caagttgatttccaaaacatccagcaactaagttgggtgacgcctatgggaggtcgtatc 180
|| ||||| ||||| | |||||| | ||||| |||||||||||||||||||||||||||
Sbjct: 50761 caggttgagttccaggatatccagaagctaagctgggtgacgcctatgggaggtcgtatc 50820
Query: 181 ttcactgaaaaattgaagtgtggaaatgcctcttatgttcgttatattatcaacgatgtg 240
|||||||||||||| || ||| ||||| |||||||||||||||| ||| | ||||||||
Sbjct: 50821 ttcactgaaaaattaaaatgtagaaattcctcttatgttcgttacattgttaacgatgtt 50880
Query: 241 attattccagttccaggttgcacctcaggtccagggttttcctgtcctatcgaggacttt 300
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 50881 gttattccagttccaggttgcacctcaggtccagggttctcctgtcctatcgaggacttt 50940
Query: 301 gacgattacatcacaaacagattgaatggcattgactatgtttccagttgcgaagttcaa 360
|||||||||||| || ||||||||||||| |||||||||||||||||||||||| | |||
Sbjct: 50941 gacgattacatcgcagacagattgaatggaattgactatgtttccagttgcgaaatccaa 51000
Query: 361 caggtgtctaacaccaccgaacttactttytactgggactacaatgaagtggagtacaac 420
||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 51001 caggtgtctaacatcaccgaacttactttctactgggactacaatgaagtggagtacaat 51060
Query: 421 ggtcccgttagtaacaagtaagtct 445
||||| ||||||||||| |||||||
Sbjct: 51061 ggtcctgttagtaacaaataagtct 51085
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5955
Number of Sequences: 1807
Number of extensions: 5955
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 2
length of query: 846
length of database: 10,358,551
effective HSP length: 16
effective length of query: 830
effective length of database: 10,329,639
effective search space: 8573600370
effective search space used: 8573600370
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)